Functionalization of Bacterial Cellulose and Related Surfaces Using a Facile Coupling Reaction by Thermoresponsive Catalyst.

Recently, bacterial cellulose and related materials attracted significant attention for applications such as leather-like materials, wound healing materials, etc., due to their abundance in pure form and excellent biocompatibility. Chemical modification of bacterial cellulose further helps to improve specific properties for practical utility and economic viability. However, in most cases, chemical modification of cellulose materials involves harsh experimental conditions such as higher temperatures or organic solvents, which may destroy the 3-dimensional network of bacterial cellulose, thereby altering its characteristic properties. Hence, in this work, we have adopted the Suzuki coupling methodology, which is relatively unexplored for chemically modifying cellulose materials. As the Suzuki coupling reaction is tolerable against air and water, modification can be done under mild conditions so that the covalently modified cellulose materials remain intact without destroying their 3-dimensional form. We performed Suzuki coupling reactions on cellulose surfaces using a recently developed thermoresponsive catalyst consisting of poly(N-isopropylacrylamide) (PNIPAM)-tagged N-heterocyclic carbene (NHC)-based palladium(II) complex. The thermoresponsive nature of the catalyst particularly helped to perform reactions in a water medium under mild conditions considering the biological nature of the substrates, where separation of the catalyst can be easily achieved by tuning temperature. The boronic acid derivatives have been chosen to alter the wettability behavior of bacterial cellulose. Bacterial cellulose (BC) obtained from fermentation on a lab scale using a cellulose-producing bacterium called Gluconacetobacter kombuchae (MTCC 6913) under Hestrin-Schramm (HS) medium, or kombucha-derived bacterial cellulose (KBC) obtained from kombucha available in the market or cotton-cellulose (CC) was chosen for the surface functionalization to find the methodology's diversity. Movie files in the Supporting Information and figures in the manuscript demonstrated the utility of the methodology for fluorescent labeling of bacterial cellulose and related materials. Finally, contact angle analysis of the surfaces showed the hydrophobic natures of some functionalized BC-based materials, which are important for the practical use of biomaterials in wet climatic conditions.

Valorization of tannery solid wastes for sustainable enzyme induced carbonate precipitation process.

Biocementation via enzyme induced carbonate precipitation (EICP) is an emerging ground improvement technique that utilizes urease for calcium carbonate precipitation. Usage of expensive laboratory grade chemicals in EICP hinders its implementation at field level applications. In this study, the feasibility of utilizing solid wastes generated from leather industry was investigated for EICP process. Initially, the proteinaceous fleshing waste was used as nitrogen source for production of an extracellular urease from Arthrobacter creatinolyticus MTCC 5604 followed by its subsequent use in EICP with suspended solids of tannery lime liquor, as alternative calcium source. The calcium ion solution was prepared by treating suspended solids of lime liquor with 1 N HCl. The EICP was optimum with 1000 U of urease, 1.0 M urea and 1.0 M CaCl2.2H2O for test tube experiments. Sand solidification experiments under optimal conditions with five times addition of cementation solution yielded a maximum unconfined compressive strength (UCS) of 810 kPa with laboratory grade CaCl2.2H2O and 780 kPa with calcium from lime liquor. The crystalline phases and morphology of the CaCO3 precipitate were analyzed by XRD, FTIR and SEM-EDX. The results showed the formation of more stable calcite in EICP with calcium obtained from lime liquor, while calcite and vaterite polymorphs were obtained with CaCl2.2H2O. Utilization of fleshing waste and lime liquor in EICP could reduce the pollution load and sludge formation that are generated during the pre-tanning operations of leather manufacturing. The results indicated the viability of process to achieve cost effective and sustainable biocementation for large scale applications.

A deep dive into the darning effects of biomaterials in infarct myocardium: current advances and future perspectives.

Myocardial infarction (MI) occurs due to the obstruction of coronary arteries, a major crux that restricts blood flow and thereby oxygen to the distal part of the myocardium, leading to loss of cardiomyocytes and eventually, if left untreated, leads to heart failure. MI, a potent cardiovascular disorder, requires intense therapeutic interventions and thereby presents towering challenges. Despite the concerted efforts, the treatment strategies for MI are still demanding, which has paved the way for the genesis of biomaterial applications. Biomaterials exhibit immense potentials for cardiac repair and regeneration, wherein they act as extracellular matrix replacing scaffolds or as delivery vehicles for stem cells, protein, plasmids, etc. This review concentrates on natural, synthetic, and hybrid biomaterials; their function; and interaction with the body, mechanisms of repair by which they are able to improve cardiac function in a MI milieu. We also provide focus on future perspectives that need attention. The cognizance provided by the research results certainly indicates that biomaterials could revolutionize the treatment paradigms for MI with a positive impact on clinical translation.

Genetically encoded dihydroxyphenylalanine coupled with tyrosinase for strain promoted labeling.

Protein modifications through genetic code engineering have a remarkable impact on macromolecule engineering, protein translocation, protein-protein interaction, and cell biology. We used the newly developed molecular biology approach, genetic code engineering, for fine-tuning of proteins for biological availability. Here, we have introduced 3, 4-dihydroxy-l-phenylalanine in recombinant proteins by selective pressure incorporation method for protein-based cell labeling applications. The congener proteins treated with tyrosinase convert 3, 4-dihydroxy-l-phenylalanine to dopaquinone for strain-promoted click chemistry. Initially, the single-step Strain-Promoted Oxidation-Controlled Cyclooctyne-1,2-quinone Cycloaddition was studied using tyrosinase catalyzed congener protein and optimized the temporally controlled conjugation with (1R,8S,9s)-Bicyclo[6.1.0]non-4-yn-9-ylmethanol. Then, the feasibility of tyrosinase-treated congener annexin A5 with easily reactive quinone functional moiety was conjugated with fluorescent tag dibenzocyclooctyne-PEG4-TAMRA for labeling of apoptotic cells. Thus, the congener proteins-based products demonstrate selective cell labeling and apoptosis detection in EA.hy926 cells even after the protein modifications. Hence, genetic code engineering can be coupled with click chemistry to develop various protein-based fluorescent labels.

Esterification of Polymeric Carbohydrate Through Congener Cutinase-Like Biocatalyst.

Cutinase-like enzymes (CLEs) are bi-functional hydrolases, which share the conserved catalytic site of lipase and consensus pentapeptide sequence of cutinase. Here, we have genetically replaced the canonical amino acids (CAA) by their non-canonical fluorinated surrogates to biosynthesize a novel class of congener biocatalyst for esterification of polymeric carbohydrate with long-chain fatty acid. It is a new enzyme-engineering approach used to manipulate industrially relevant biocatalyst through genetic incorporation of new functionally encoded non-canonical amino acids (NCAA). Global fluorination of CLE improved its catalytic, functional, and structural stability. Molecular docking studies confirmed that the fluorinated CLE (FCLE) had developed a binding affinity towards different fatty acids compared with the parent CLE. Importantly, FCLE could catalyze starch oleate synthesis in 24 h with a degree of substitution of 0.3 ± 0.001. Biophysical and microscopic analysis substantiated the efficient synthesis of the ester by FCLE. Our data represent the first step in the generation of an industrially relevant fluorous multifunctional enzyme for facile synthesis of high fatty acid starch esters.

Potentiometric biosensor for determination of urea in milk using immobilized Arthrobacter creatinolyticus urease.

The extracellular urease from Arthrobacter creatinolyticus was partially purified by ammonium sulfate precipitation and immobilized on PAN [poly(acrylonitrile-methylmethacrylate-sodium vinylsulfonate)] membrane. The urease immobilized PAN membrane exhibited an activity of 97.92U/cm(2) under the optimum conditions of 1.0% enzyme concentration, 15% glutaraldehyde, 24h immobilization time and temperature of 4°C. The changes in surface morphology of the membrane after immobilization were studied by SEM and ATR-FTIR analysis. Immobilized membrane was associated with potentiometric electrode for calibration of biosensor and the results showed a linear response for wide range of urea concentration from 1 to 100mM. The immobilized urease had good storage stability for a period of 70days at 4°C and could be effectively reused for 13cycles. Urease immobilized membrane was also employed in analysis of urea spiked milk samples.

Microbial degradation of aliphatic and aliphatic-aromatic co-polyesters.

Biodegradable plastics (BPs) have attracted much attention since more than a decade because they can easily be degraded by microorganisms in the environment. The development of aliphatic-aromatic co-polyesters has combined excellent mechanical properties with biodegradability and an ideal replacement for the conventional nondegradable thermoplastics. The microorganisms degrading these polyesters are widely distributed in various environments. Although various aliphatic, aromatic, and aliphatic-aromatic co-polyester-degrading microorganisms and their enzymes have been studied and characterized, there are still many groups of microorganisms and enzymes with varying properties awaiting various applications. In this review, we have reported some new microorganisms and their enzymes which could degrade various aliphatic, aromatic, as well as aliphatic-aromatic co-polyesters like poly(butylene succinate) (PBS), poly(butylene succinate)-co-(butylene adipate) (PBSA), poly(ε-caprolactone) (PCL), poly(ethylene succinate) (PES), poly(L-lactic acid) (PLA), poly(3-hydroxybutyrate) and poly(3-hydoxybutyrate-co-3-hydroxyvalterate) (PHB/PHBV), poly(ethylene terephthalate) (PET), poly(butylene terephthalate) (PBT), poly(butylene adipate-co-terephthalate (PBAT), poly(butylene succinate-co-terephthalate) (PBST), and poly(butylene succinate/terephthalate/isophthalate)-co-(lactate) (PBSTIL). The mechanism of degradation of aliphatic as well as aliphatic-aromatic co-polyesters has also been discussed. The degradation ability of microorganisms against various polyesters might be useful for the treatment and recycling of biodegradable wastes or bioremediation of the polyester-contaminated environments.

Screening and production of a potent extracellular Arthrobacter creatinolyticus urease for determination of heavy metal ions.

This paper describes the isolation of a potent extracellular urease producing microorganism, identified by 16S rRNA as Arthrobacter creatinolyticus MTCC 5604 and its medium optimization by classical one-factor-at-a-time method and central composite rotatable design (CCRD), a tool of response surface methodology (RSM). An optimal activity of 9.0 U ml(-1) was obtained by classical method and statistical optimization of the medium resulted in an activity of 17.35 U ml(-1) at 48 h and 30 °C. This activity was 4.91 times greater than the initial activity (3.53 U ml(-1) ) from the basal medium and the enzyme showed maximum activity at pH 8.0 and 60 °C and was stable at pH 7.0-9.0 and temperatures up to 50 °C. Furthermore, the enzyme was assessed for its activity reduction by determining the inhibitory concentration (IC50 ) of heavy metal ions and the inhibition of urease was in the order of Cu(II) > Cd(II) > Zn(II) > Ni(II). Urease was highly sensitive to Cu(II) and its inhibition was 94% and 100% in model solutions containing a mixture of Cu(II) with heavy metal ions Cd(II) and Zn(II), respectively. The results of these studies suggested that the enzyme could be utilized as sensors to determine the levels of Cu(II) ions in industrial effluents, contaminated soil and ground water.

Scale-up of an alkaline protease from Bacillus pumilus MTCC 7514 utilizing fish meal as a sole source of nutrients.

Fish meal grades SL1 and SL2 from Sardine (Sardinella longiceps) and NJ from Pink Perch (Nemipterus japonicas) were evaluated as a sole source of carbon and nitrogen in the medium for alkaline protease production by Bacillus pumilus MTCC 7514. The analysis of the fish meal suggests that the carbon and nitrogen contents in fish meal are sufficient to justify its choice as replacement for other nutrients. Protease production increased significantly (4,914 U/ml) in medium containing only fish meal, compared with the basal medium (2,646 U/ml). However, the elimination of inorganic salts from media reduced the protease productivity. In addition, all the three grades of fish meal yielded almost the same amounts of protease when employed as the sole source of carbon and nitrogen. Nevertheless, the best results were observed in fish meal SL1 medium. Furthermore, protease production was enhanced to 6,966 U/ml and 7,047 U/ml on scaling up from flask (4,914 U/ml) to 3.7 and 20 L fermenters, respectively, using fish meal (10 g/l). Similarly, the corresponding improvement in productivities over flask (102.38 U/ml/h) was 193.5 and 195.75 U/ml/h in 3.7 and 20 L fermenters, respectively. The crude protease was found to have dehairing ability in leather processing, which is bound to have great environmental benefits.

Mixed substrate solid state fermentation for production and extraction of lipase from Aspergillus niger MTCC 2594.

A novel mixed substrate solid-state fermentation (SSF) process has been developed for Aspergillus niger MTCC 2594 using wheat bran (WB) and gingelly oil cake (GOC) and the results showed that addition of GOC to WB (WB : GOC, 3 : 1, w/w) increased the lipase activity by 36.0% and the activity was 384.3+/-4.5 U/g dry substrate at 30 degrees C and 72 h. Scale up of lipase production to 100 g and 1 kg tray-level batch fermentation resulted in 95.0% and 84.0% of enzyme activities respectively at 72 h. A three-stage multiple contact counter-current extraction yielded 97% enzyme recovery with a contact time of 60 min. However, extraction by simple percolation and plug-flow methods resulted in decreased enzyme recoveries. The mixed substrate SSF process has resulted in a significant increase in specific activity (58.9%) when compared to a submerged fermentation (SmF) system. Furthermore, an efficient process of extraction has been standardized with this process. Use of GOC along with WB as potential raw materials for enzyme production could be of great commercial significance. This is the first report on the production and extraction of lipase from Aspergillus niger using mixed solid substrates, WB and GOC, which are potential raw materials for the production of enzymes and other value-added products.

Cutinase-like enzyme from the yeast Cryptococcus sp. strain S-2 hydrolyzes polylactic acid and other biodegradable plastics.

A purified lipase from the yeast Cryptococcus sp. strain S-2 exhibited remote homology to proteins belonging to the cutinase family rather than to lipases. This enzyme could effectively degrade the high-molecular-weight compound polylactic acid, as well as other biodegradable plastics, including polybutylene succinate, poly (epsilon-caprolactone), and poly(3-hydroxybutyrate).

A novel synthetic peptide derivative from lactoferrin exhibiting antimicrobial activity.

A tetrapeptide derivative Boc-L-Lys(Boc)-L-Arg-L-Asp-L-Ser(Bu(t))-OBu(t) (PEP 1261; Boc is butoxycarbonyl, Bu(t) is t-butyl and OBu(t) is t-butyl ester), synthesized by a solution-phase strategy, exhibited antimicrobial activity against a broad spectrum of micro-organisms at an optimal concentration of 500 mug/ml. Whereas the tetrapeptide salt (L-Lys-L-Arg-L-Asp-L-Ser.HCl) was found to be fairly effective against bacterial cultures, it was not effective against fungal cultures. Comparative growth studies showed that PEP 1261 was equally as potent as the conventional antibiotics kanamycin, streptomycin and actidione for the Gram-negative bacteria Escherichia coli, Pseudomonas alcaligenes and the non-filamentous fungus Saccharomyces cerevisiae (baker's yeast), whereas 62 and 88.9% inhibition were observed for Gram-positive organisms such as Staphylococcus aureus and Bacillus thuringiensis respectively. PEP 1261 might exert its antimicrobial activity by permeabilizing the bacterial membrane, and this was confirmed by an increase in beta-galactosidase activity.